Enterobacterales draft genome sequences: 15 historical (1998–2004) and 30 contemporary (2015–2016) clinical isolates from Pakistan

Matthew A. Crawford; Christine Lascols; Sara Lomonaco; Ruth E. Timme; Debra J. Fisher; Kevin Anderson; David R. Hodge; Stephen A. Morse; Segaran P. Pillai; Shashi K. Sharma; Erum Khan; Marc W. Allard; Molly A. Hughes

doi:10.1128/MRA.00163-23

Enterobacterales draft genome sequences: 15 historical (1998–2004) and 30 contemporary (2015–2016) clinical isolates from Pakistan

Matthew A. Crawford
, Christine Lascols
, Sara Lomonaco
, Ruth E. Timme
, Debra J. Fisher
, Kevin Anderson
, David R. Hodge
, Stephen A. Morse
, Segaran P. Pillai
, Shashi K. Sharma
, Erum Khan
, Marc W. Allard
, Molly A. Hughes

Department of Pathology and Laboratory Medicine, Medical College, Pakistan

Research output: Contribution to journal › Article › peer-review

Abstract

The continued emergence and spread of antimicrobial resistance among pathogenic bacteria are ever-growing threats to health and economy. Here, we report the draft genomes for 45 Enterobacterales clinical isolates, including historical and contemporary drug-resistant organisms, obtained in Pakistan between 1998 and 2016: 5 Serratia, 3 Salmonella, 3 Enterobacter, and 34 Klebsiella.

Original language	English (US)
Journal	Genome Announcements
Volume	12
Issue number	9
DOIs	https://doi.org/10.1128/MRA.00163-23
Publication status	Published - Sept 2023

Keywords

AMRFinderPlus
Enterobacter
Enterobacterales
Klebsiella
Pakistan
Salmonella
Serratia
antimicrobial resistance
whole-genome sequencing

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10.1128/MRA.00163-23

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Crawford, M. A., Lascols, C., Lomonaco, S., Timme, R. E., Fisher, D. J., Anderson, K., Hodge, D. R., Morse, S. A., Pillai, S. P., Sharma, S. K., Khan, E., Allard, M. W., & Hughes, M. A. (2023). Enterobacterales draft genome sequences: 15 historical (1998–2004) and 30 contemporary (2015–2016) clinical isolates from Pakistan. Genome Announcements, 12(9). https://doi.org/10.1128/MRA.00163-23

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title = "Enterobacterales draft genome sequences: 15 historical (1998–2004) and 30 contemporary (2015–2016) clinical isolates from Pakistan",

abstract = "The continued emergence and spread of antimicrobial resistance among pathogenic bacteria are ever-growing threats to health and economy. Here, we report the draft genomes for 45 Enterobacterales clinical isolates, including historical and contemporary drug-resistant organisms, obtained in Pakistan between 1998 and 2016: 5 Serratia, 3 Salmonella, 3 Enterobacter, and 34 Klebsiella.",

keywords = "AMRFinderPlus, Enterobacter, Enterobacterales, Klebsiella, Pakistan, Salmonella, Serratia, antimicrobial resistance, whole-genome sequencing",

author = "Crawford, \{Matthew A.\} and Christine Lascols and Sara Lomonaco and Timme, \{Ruth E.\} and Fisher, \{Debra J.\} and Kevin Anderson and Hodge, \{David R.\} and Morse, \{Stephen A.\} and Pillai, \{Segaran P.\} and Sharma, \{Shashi K.\} and Erum Khan and Allard, \{Marc W.\} and Hughes, \{Molly A.\}",

note = "Publisher Copyright: Copyright {\textcopyright} 2023 Crawford et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.",

year = "2023",

month = sep,

doi = "10.1128/MRA.00163-23",

language = "English (US)",

volume = "12",

journal = "Genome Announcements",

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Crawford, MA, Lascols, C, Lomonaco, S, Timme, RE, Fisher, DJ, Anderson, K, Hodge, DR, Morse, SA, Pillai, SP, Sharma, SK, Khan, E, Allard, MW & Hughes, MA 2023, 'Enterobacterales draft genome sequences: 15 historical (1998–2004) and 30 contemporary (2015–2016) clinical isolates from Pakistan', Genome Announcements, vol. 12, no. 9. https://doi.org/10.1128/MRA.00163-23

TY - JOUR

T1 - Enterobacterales draft genome sequences

T2 - 15 historical (1998–2004) and 30 contemporary (2015–2016) clinical isolates from Pakistan

AU - Crawford, Matthew A.

AU - Lascols, Christine

AU - Lomonaco, Sara

AU - Timme, Ruth E.

AU - Fisher, Debra J.

AU - Anderson, Kevin

AU - Hodge, David R.

AU - Morse, Stephen A.

AU - Pillai, Segaran P.

AU - Sharma, Shashi K.

AU - Khan, Erum

AU - Allard, Marc W.

AU - Hughes, Molly A.

PY - 2023/9

Y1 - 2023/9

N2 - The continued emergence and spread of antimicrobial resistance among pathogenic bacteria are ever-growing threats to health and economy. Here, we report the draft genomes for 45 Enterobacterales clinical isolates, including historical and contemporary drug-resistant organisms, obtained in Pakistan between 1998 and 2016: 5 Serratia, 3 Salmonella, 3 Enterobacter, and 34 Klebsiella.

AB - The continued emergence and spread of antimicrobial resistance among pathogenic bacteria are ever-growing threats to health and economy. Here, we report the draft genomes for 45 Enterobacterales clinical isolates, including historical and contemporary drug-resistant organisms, obtained in Pakistan between 1998 and 2016: 5 Serratia, 3 Salmonella, 3 Enterobacter, and 34 Klebsiella.

KW - AMRFinderPlus

KW - Enterobacter

KW - Enterobacterales

KW - Klebsiella

KW - Pakistan

KW - Salmonella

KW - Serratia

KW - antimicrobial resistance

KW - whole-genome sequencing

UR - https://www.scopus.com/pages/publications/85172407407

U2 - 10.1128/MRA.00163-23

DO - 10.1128/MRA.00163-23

M3 - Article

AN - SCOPUS:85172407407

SN - 2169-8287

VL - 12

JO - Genome Announcements

JF - Genome Announcements

IS - 9

ER -

Enterobacterales draft genome sequences: 15 historical (1998–2004) and 30 contemporary (2015–2016) clinical isolates from Pakistan

Abstract

Keywords

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